species:   Artha
pid:       MI0017894
parent:    ath-MIR5024
paralog:   
locus:     1:16766259-16766438
matures:   ['AUGACAAGGCCAAGAUAUAACA', 'CCGUAUCUUGGCCUUGUCAUUU']
srr:       SRR9216049
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216049.cram 1:16766259-16766438

2 out of bounds
21 alignments
2 proper strand
2 stranded perfect matches

                            ***********************                                                                                ***********************                          
GGAUAUUGAACCGAAGAUCGACGGUUGAGAUGACAAGGCCAAGAUAUAACAAAAAGAUAUUAUUCUAGAAGAUAAAUGUUAAUAUUGAAGUUUAGAAAGUUUAACAUUUAUCUUUUAGAAUAAUAUUUUCUUGCCGUAUCUUGGCCUUGUCAUUUCAACCGUUGAUCUCUGUCGAUCUCU
(((.(((((.(.((.((((((((((((((((((((((((((((((((..(((.(((((((((((((((((((((((((((((..((..........))..))))))))))))))))))))))))))))).)))..)))))))))))))))))))))))))))))))))).)))))).)))
-----------------------------AUGACAAGGCCAAGAUAUAACA--------------------------------------------------------------------------------------------------------------------------------- l=22 a=0 c
-------------------------------------------------------------------------------------------------------------------------------------CCGUAUCUUGGCCUUGUCAUUU------------------------- l=22 a=0 c*
-------------------------------------------------------------------------------------------------------------------------------------CCGUAUCUUGGCCUUGUCAUU-------------------------- l=21 a=2 ma
------------------------------UGACAAGGCCAAGAUAUAACA--------------------------------------------------------------------------------------------------------------------------------- l=21 a=0 ma*

-------------------------------------------------------------------------------------------------------------------------------------CCGUAUCUUGGCCUUGUCAUU-------------------------- l=21 a=2 (ma)

mb-01011
ax-1011011
ku-01
ss-111111011100
fn-001
